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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10007418_10007704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10007418 - 10007704

Intron Length:

287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CTTGTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CAGTGCTGAGCC

Flanking Amino Acid:

QCLPGSGICLNCQHNTEGDH

Intron Amino Acid Position:

1363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

31.1

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

37.6

-1.4

2.8

48.3

41.8

Minor BPS

44.4

-0.4

2.1

52.26

44.8

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828