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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10008792_10009344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10008792 - 10009344

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTCCCTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

CAGCACATAATT

Flanking Amino Acid:

GDAVTAKNCTQCNCSPCGTD

Intron Amino Acid Position:

1504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.3

45.2

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

80.6

0.69

0.9

77.6

31.1

Minor 5ss

27.6

-2.6

26.6

36.9

Minor BPS

-0.1

1.8

60.75

42.6

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920