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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10009446_10009535_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10009446 - 10009535

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

CCTCTGTCAACG

Flanking Amino Acid:

VTGQHCDRCQEGYYGFKGCS

Intron Amino Acid Position:

1538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

63.3

0.33

1.2

39.8

Major PPT

75.9

0.58

0.8

69.4

36.9

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

43.3

-0.6

2.2

48.07

45.5

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828