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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10009717_10009993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10009717 - 10009993

Intron Length:

277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTACACTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TGTTGTTACACT

Flanking Amino Acid:

YWGFSERGCRKCECRGGSCD

Intron Amino Acid Position:

1598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

74.2

36.1

Major BPS

71.4

0.53

1.2

63.4

Major PPT

69.9

0.45

65.7

40.4

Minor 5ss

33.1

-1.9

37.7

Minor BPS

46.1

-0.2

2.4

71.8

45.5

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920