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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10010138_10010220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10010138 - 10010220

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CCGTGCTGAGCG

Flanking Amino Acid:

ANGPDSMRCEVCDSCVLLLL

Intron Amino Acid Position:

1646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

70.6

0.46

65.8

35.9

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

42.3

-0.7

2.1

43.53

47.9

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828