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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10011577_10012110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10011577 - 10012110

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GATTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTGGTGCTAACA

Flanking Amino Acid:

DIRSIQKSIGDLVRQMAQFG

Intron Amino Acid Position:

1771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

83.2

30.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

80.4

0.68

0.9

36.3

Minor 5ss

33.6

-1.9

41.3

45.3

Minor BPS

45.6

-0.3

2.4

62.99

43.7

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828