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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10015409_10015642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10015409 - 10015642

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCTTG

5'SS Class:

major

3'SS Sequence:

TCTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

TGGGCTTGGATT

Flanking Amino Acid:

ITQARNAASKVKVPMKFNGS

Intron Amino Acid Position:

2212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.8

42.7

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

85.9

0.81

0.7

77.8

31.1

Minor 5ss

40.6

-1

3.3

54.5

49.7

Minor BPS

48.8

-0

1.6

63.65

41.5

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828