Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_10016207_10016644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10016207 - 10016644

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGAGAC

5'SS Class:

major

3'SS Sequence:

CTCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAC

U12 Branch Point Sequence:

CTTACCTTGAGT

Flanking Amino Acid:

GEQFATISINRILQYGQMSV

Intron Amino Acid Position:

2319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

60.8

38.7

Major BPS

61.4

0.28

33.7

Major PPT

74.6

0.55

0.8

68.4

31.8

Minor 5ss

29.8

-2.3

3.6

41.4

45.4

Minor BPS

64.6

0.54

1.7

79.89

42.4

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828