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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10017923_10018151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10017923 - 10018151

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGGAG

5'SS Class:

major

3'SS Sequence:

CCTCTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGCAG

U12 Branch Point Sequence:

TTTTTCTCCTCT

Flanking Amino Acid:

LTVSSTTNKAIQIFLLKMNN

Intron Amino Acid Position:

2514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.3

41.8

Major BPS

39.6

-0.6

1.7

46.5

Major PPT

78.6

0.64

0.8

72.3

32.4

Minor 5ss

-2.4

3.5

38.1

46.8

Minor BPS

42.2

-0.5

3.6

79.56

42.7

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828