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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10018304_10018632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10018304 - 10018632

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTCTGATAACG

Flanking Amino Acid:

GGVPPALLPPSLKALFPTGG

Intron Amino Acid Position:

2564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

67.6

39.4

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

76.3

0.59

0.8

69.4

31.2

Minor 5ss

27.7

-2.6

2.9

32.8

42.1

Minor BPS

45.8

-0.4

2.3

58.32

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920