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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10018766_10019009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10018766 - 10019009

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACG

5'SS Class:

strong_major

3'SS Sequence:

GCGTCCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TGCCTCTCACCT

Flanking Amino Acid:

VSYGCTSDLLVARSVSVHGH

Intron Amino Acid Position:

2609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

42.9

Major BPS

72.7

0.56

30.1

Major PPT

75.8

0.58

0.9

68.9

Minor 5ss

39.8

-1.1

2.8

47.1

42.4

Minor BPS

48.2

-0

1.8

65.97

44.5

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828