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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10019725_10019806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10019725 - 10019806

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCACGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

AGTAACAAAACT

Flanking Amino Acid:

TGCIANVFVKRRSEPQMVVD

Intron Amino Acid Position:

2755

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

62.7

0.29

0.9

57.8

32.2

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

45.4

-0.2

2.1

66.5

43.2

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920