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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10019940_10020079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10019940 - 10020079

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGCT

5'SS Class:

major

3'SS Sequence:

GCAACTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTCCAT

U12 Branch Point Sequence:

GCTCCCCTCACT

Flanking Amino Acid:

ALKKDRRKPKVSGKPLSKDR

Intron Amino Acid Position:

2800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.6

41.2

Major BPS

55.9

0.15

1.3

66.4

39.9

Major PPT

62.4

0.28

0.9

36.1

Minor 5ss

37.5

-1.4

3.6

57.4

46.7

Minor BPS

49.6

0.05

2.1

71.09

45.2

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920