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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10020229_10020348_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10020229 - 10020348

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

GCCCCCATCACC

Flanking Amino Acid:

FEEIPASFSQRSHFSLEVKL

Intron Amino Acid Position:

2849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

76.5

0.6

0.8

69.5

31.2

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

45.9

-0.3

53.53

43.9

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920