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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10020921_10021040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10020921 - 10021040

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTGCACTCACTC

Flanking Amino Acid:

PAGKAKVHVPDTSASSFDGC

Intron Amino Acid Position:

2963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

70.8

39.4

Major BPS

72.7

0.56

30.1

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

32.3

-2

3.6

48.7

Minor BPS

42.3

-0.6

1.9

48.73

41.5

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828