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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10021446_10021541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10021446 - 10021541

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGGA

5'SS Class:

major

3'SS Sequence:

CCTCTTGTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

AGTTCAGTGAGC

Flanking Amino Acid:

HLLLYMEEMKVTVRANTGSD

Intron Amino Acid Position:

3060

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

42.4

Major BPS

0.72

38.9

Major PPT

66.3

0.37

60.8

40.2

Minor 5ss

34.1

-1.8

3.6

47.1

48.3

Minor BPS

-0.5

2.4

57.9

40.9

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920