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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10039854_10040490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10039854 - 10040490

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

CAAAAGCTAAGT

Flanking Amino Acid:

HRVEGYIQDKNKKKLCVIYG

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

79.4

0.66

0.8

73.1

31.8

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

34.8

-1

2.4

48.55

43.6

Associated Gene:

Gene:

OSBPL2

Ensembl Gene ID:

ENSAPLG00000011733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040567

10033902 - 10066443

32542

ENSAPLT00000012269

10034266 - 10052897

18632