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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10045740_10046470_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10045740 - 10046470

Intron Length:
731

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTACC

5'SS Class:
strong_major

3'SS Sequence:
TATTTGCTTATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
GTTCTCATAACA

Flanking Amino Acid:
SHADPLERMQAVAAFAVSAV

Intron Amino Acid Position:
101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
96.6
1.1
0.7
87.9
25.6

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
79.3
0.66
0.9
73.4
36.9

Minor 5ss
37
-1.5
2.6
46.5
41.8

Minor BPS
63.4
0.42
1.6
74.69
36

Associated Gene:

Gene:
OSBPL2

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10033902 - 10066443
32542

10034266 - 10052897
18632