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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10091771_10092069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10091771 - 10092069

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

CCTCCGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

TGCGGTGTAAAT

Flanking Amino Acid:

LNLAISDFLVGAFCIPLYVP

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

58.1

42.1

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

71.5

0.48

0.9

64.1

36.6

Minor 5ss

-1.6

3.3

41.1

45.6

Minor BPS

40.2

-0.6

2.3

56.87

Associated Gene:

Gene:

HRH3

Ensembl Gene ID:

ENSAPLG00000012513

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013028

10091326 - 10094031

2706