Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_10144229_10146077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10144229 - 10146077

Intron Length:

1849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

GAATTTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

AGGCACTTAATC

Flanking Amino Acid:

SSEPHQLSSKGAGFPPVHPV

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.2

59.7

39.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

78.5

0.64

69.6

45.4

Minor 5ss

35.8

-1.6

3.3

39.9

45.7

Minor BPS

56.2

0.17

1.5

60.39

38.4

Associated Gene:

Gene:

LSM14B

Ensembl Gene ID:

ENSAPLG00000013203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046733

10141981 - 10151433

9453

ENSAPLT00000013754

10141981 - 10151433

9453