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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10169974_10171953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10169974 - 10171953

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCCG

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

CTCTGTTTAACC

Flanking Amino Acid:

GLSAPELAKAGAGAVQGGVI

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

47.1

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

35.5

-1.6

3.4

48.5

47.2

Minor BPS

61.9

0.35

1.8

69.26

Associated Gene:

Gene:

TAF4

Ensembl Gene ID:

ENSAPLG00000013454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014040

10169130 - 10206025

36896