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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10197522_10197871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10197522 - 10197871

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGATGTACAAAT

Flanking Amino Acid:

QQIQLNQLQTVPVVKPTVLP

Intron Amino Acid Position:

983

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

86.2

0.81

0.8

80.9

31.1

Minor 5ss

30.8

-2.2

3.7

47.1

48.3

Minor BPS

41.5

-0.5

2.1

60.39

42.6

Associated Gene:

Gene:

TAF4

Ensembl Gene ID:

ENSAPLG00000013454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014040

10169130 - 10206025

36896