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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10197987_10198617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10197987 - 10198617

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCGTTTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATGAGTT

Flanking Amino Acid:

KLKEPGGGSFRDDDDINDVA

Intron Amino Acid Position:

1021

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.1

0.48

74.9

33.8

Minor 5ss

27.1

-2.6

42.4

Minor BPS

45.1

-0.2

67.37

43.2

Associated Gene:

Gene:

TAF4

Ensembl Gene ID:

ENSAPLG00000013454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014040

10169130 - 10206025

36896