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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10199536_10200856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10199536 - 10200856

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGTA

5'SS Class:

strong_major

3'SS Sequence:

GCTATGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AGATACATAATG

Flanking Amino Acid:

TAQQKNISYKDDERYEQASD

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.1

81.5

32.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

76.9

0.6

72.7

42.2

Minor 5ss

41.8

-0.9

3.2

58.1

46.5

Minor BPS

48.4

-0.2

1.8

54.02

40.4

Associated Gene:

Gene:

TAF4

Ensembl Gene ID:

ENSAPLG00000013454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014040

10169130 - 10206025

36896