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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10201704_10201784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10201704 - 10201784

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGACAAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CTTGTTTTGACA

Flanking Amino Acid:

QLRLKQKAKEMQQQELAQMR

Intron Amino Acid Position:

1183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

63.8

0.31

1.1

56.6

42.5

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

61.5

0.36

1.4

68.82

38.3

Associated Gene:

Gene:

TAF4

Ensembl Gene ID:

ENSAPLG00000013454

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014040

10169130 - 10206025

36896