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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10244873_10246776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10244873 - 10246776

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCATTTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTGGTTTCACT

Flanking Amino Acid:

DEEGGGEEDQDYDLSQLQQP

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

73.2

0.52

0.9

67.3

37.7

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

47.7

-0

2.3

70.57

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509