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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10246917_10251312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10246917 - 10251312

Intron Length:

4396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCACTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

AGCTCCTTCACT

Flanking Amino Acid:

AILICIIILLTMVLLFVVWM

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

77.6

32.3

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

82.4

0.73

0.8

76.1

32.4

Minor 5ss

35.7

-1.6

3.2

45.3

36.6

Minor BPS

67.1

0.62

1.8

79.07

42.9

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509