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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10252836_10256411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10252836 - 10256411

Intron Length:

3576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCCA

5'SS Class:

major

3'SS Sequence:

CTCTCCCGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

CCTTGTTCAGCT

Flanking Amino Acid:

YEATFLAADNGIPPASGTGT

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

58.9

41.8

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

0.47

0.9

68.8

31.6

Minor 5ss

33.2

-1.9

40.8

Minor BPS

45.1

-0.2

2.1

63.32

47.3

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014447

10243123 - 10420631

177509

ENSAPLT00000014450

10243190 - 10421072

177883