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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10256555_10259392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10256555 - 10259392

Intron Length:

2838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGAC

5'SS Class:

major

3'SS Sequence:

CCTTTCTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATGTATTTATTT

Flanking Amino Acid:

DPDRFMQQAVRYSKLSDPAN

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

65.6

34.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

23.9

-3

3.3

31.3

43.2

Minor BPS

53.1

0.18

1.7

70.85

40.8

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509