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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10264430_10283692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10264430 - 10283692

Intron Length:

19263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

CTTTTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTCTTTTATTT

Flanking Amino Acid:

DNPPEFTTSTYSGEVPENRV

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.7

0.89

0.7

84.8

28.7

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

0.3

1.5

73.36

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509