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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10318771_10332681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10318771 - 10332681

Intron Length:

13911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGGTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TAGTCCTGATAT

Flanking Amino Acid:

NGSVDEGSKPGTYVMTVTAN

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.6

42.2

Major BPS

78.8

0.71

67.6

40.6

Major PPT

61.2

0.25

1.1

58.8

41.1

Minor 5ss

39.3

-1.2

3.5

55.1

49.1

Minor BPS

52.6

0.16

1.9

71.78

44.4

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509