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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10332827_10340080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10332827 - 10340080

Intron Length:

7254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGCACA

5'SS Class:

major

3'SS Sequence:

TGCTTATTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TATGCTTTCATT

Flanking Amino Acid:

MDREERASYHLRAHAVDMNG

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

77.4

0.62

0.9

69.3

40.8

Minor 5ss

42.1

-0.9

2.8

54.7

42.4

Minor BPS

57.7

0.32

1.8

76.34

41.1

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509