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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10340237_10402102_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10340237 - 10402102

Intron Length:

61866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

TTGTTTCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

AACTTATTGATT

Flanking Amino Acid:

RGPFPQQLVRIRSDKDKEIH

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

65.8

41.7

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

77.2

0.61

0.9

70.9

40.1

Minor 5ss

29.6

-2.3

3.2

30.1

Minor BPS

52.3

0.15

1.6

66.5

38.3

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509