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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10402280_10419749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10402280 - 10419749

Intron Length:

17470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GCTTCCTAAACA

Flanking Amino Acid:

GEKLQHNGHKPKGRKSIPGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.8

22.9

Major BPS

0.45

0.9

67.6

25.3

Major PPT

67.3

0.39

62.4

37.7

Minor 5ss

39.6

-1.2

3.1

55.7

48.5

Minor BPS

69.9

0.62

1.7

75.93

41.5

Associated Gene:

Gene:

CDH4

Ensembl Gene ID:

ENSAPLG00000013848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014450

10243190 - 10421072

177883

ENSAPLT00000014447

10243123 - 10420631

177509