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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10898870_10901683_R

Intron Information:

Intron Rank:

154693

Intron Class:

major

Intron Phase:

Intron Coordinates:

10898870 - 10901683

Intron Length:

2814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TCTTTTTCCATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.1

0.68

0.8

72.1

37.9

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

47.6

-0.2

1.9

61.08

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043753

10881830 - 10901776

19947