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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10938223_10939574_F

Intron Information:

Intron Rank:

144311

Intron Class:

major

Intron Phase:

Intron Coordinates:

10938223 - 10939574

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTCCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TGTGTTTGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

66.1

0.36

1.1

64.3

41.7

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

47.6

-0.2

1.8

58.9

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045046

10935868 - 10940143

4276

ENSAPLT00000043633

10936333 - 10940143

3811