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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10938223_11025190_F

Intron Information:

Intron Rank:

144316

Intron Class:

major

Intron Phase:

Intron Coordinates:

10938223 - 11025190

Intron Length:

86968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TAGTATACAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

45.7

-0.3

1.9

58.02

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046652

10936333 - 11025216

88884