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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11109512_11110612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11109512 - 11110612

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTATCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CTGTGTTTATCT

Flanking Amino Acid:

NEESSKPLCHSGLYTIQKTV

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.7

0.78

0.8

81.5

35.9

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

50.7

0.1

2.1

70.84

46.6

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035069

11107392 - 11118090

10699

ENSAPLT00000014496

11107392 - 11119651

12260