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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11112598_11112832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11112598 - 11112832

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

AAGTATTTTACT

Flanking Amino Acid:

YTIIVHGIGHDTPPQTGTGT

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

77.4

0.62

0.8

69.5

36.8

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

50.9

0.11

1.8

68.31

42.5

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035069

11107392 - 11118090

10699

ENSAPLT00000014496

11107392 - 11119651

12260