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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11112976_11113595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11112976 - 11113595

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTCCTTGTAACT

Flanking Amino Acid:

TYPDGGPNKIRYELSRDPAG

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

81.5

0.71

0.9

86.5

24.9

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

54.7

0.22

76.22

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014496

11107392 - 11119651

12260

ENSAPLT00000035069

11107392 - 11118090

10699