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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11113865_11114077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11113865 - 11114077

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

CTGGGGTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TAATTGCTAATG

Flanking Amino Acid:

TNEGILSVIKPLSYKDDSEK

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

0.45

64.9

45.6

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

44.8

-0.5

2.3

53.63

41.5

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035069

11107392 - 11118090

10699

ENSAPLT00000014496

11107392 - 11119651

12260