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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11114879_11115045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11114879 - 11115045

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATGTAC

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGCTTCTGACCT

Flanking Amino Acid:

IHLSGCLNYKTASTFKLLVK

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

31.6

-2.1

3.2

40.7

45.8

Minor BPS

54.9

0.23

1.8

72.98

43.9

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035069

11107392 - 11118090

10699

ENSAPLT00000014496

11107392 - 11119651

12260