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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11116020_11117130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11116020 - 11117130

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACAC

5'SS Class:

major

3'SS Sequence:

ACTGTTTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGATATCTAAAT

Flanking Amino Acid:

IDREKTPSFQIRFDIVHRET

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

67.9

37.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

72.2

0.5

0.9

70.5

39.7

Minor 5ss

32.3

-2

3.1

42.2

44.6

Minor BPS

48.3

-0

1.9

69.16

40.8

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014496

11107392 - 11119651

12260

ENSAPLT00000035069

11107392 - 11118090

10699