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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11118091_11119618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11118091 - 11119618

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTAATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTCTTTTTAATA

Flanking Amino Acid:

DLLAVLLLLQVTATNSFSHD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

69.3

0.43

1.1

76.8

35.4

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

68.4

0.57

1.2

69.67

37.9

Associated Gene:

Gene:

CDH26

Ensembl Gene ID:

ENSAPLG00000013919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014496

11107392 - 11119651

12260