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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11138732_11139403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11138732 - 11139403

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTACTCTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTTCTTTTACT

Flanking Amino Acid:

MAARNETQFEKLIDEATR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

33.4

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

75.8

0.58

72.4

37.5

Minor 5ss

-1.1

53.2

44.1

Minor BPS

80.4

1.04

1.5

96.11

29.5

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633