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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11146463_11147010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11146463 - 11147010

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGTC

5'SS Class:

major

3'SS Sequence:

GTTTTTTGTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTGCAATT

Flanking Amino Acid:

EEEVVLYNLEEKDSKKLLTI

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

65.8

38.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.6

0.76

0.9

76.9

42.1

Minor 5ss

39.9

-1.1

3.6

58.4

46.5

Minor BPS

51.6

0.13

2.1

79.05

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633