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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11147160_11148223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11147160 - 11148223

Intron Length:

1064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ACTCACTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATAATG

Flanking Amino Acid:

GKVYGLSKCKGFSKKQSSSV

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

72.5

0.51

0.9

34.8

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

62.4

0.25

1.9

73.61

38.6

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633