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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11150024_11151018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11150024 - 11151018

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

AATACTAGAATT

Flanking Amino Acid:

MRSPLLFVSTSTPCKGRFKL

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

68.5

0.46

73.3

28.9

Major PPT

84.3

0.77

0.9

81.2

36.5

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

48.2

-0

1.7

66.59

37.7

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633