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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11151138_11151895_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11151138 - 11151895

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTATGCATG

5'SS Class:

weak_major

3'SS Sequence:

TTGTACTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGGATT

Flanking Amino Acid:

TKNVYKEPTGNGQRHVSDNE

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.1

45.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.1

0.63

0.9

70.2

Minor 5ss

51.3

0.05

2.4

62.4

43.3

Minor BPS

56.2

0.28

1.8

80.46

35.1

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633