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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11152367_11152930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11152367 - 11152930

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TCATTTCTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTACTGATAA

Flanking Amino Acid:

SQPTGRSNKHLLPGLLESSS

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

74.4

0.55

0.9

74.9

34.5

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

48.1

-0.1

1.9

65.6

39.9

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633